Roman Bushuiev

PhD
Czech Technical University in Prague (CTU)
IOCB Prague
Discovery of new molecules through deep learning for mass spectrometry

Despite great scientific advances, only a tiny fraction of small molecules from nature has been discovered to date. Mass spectrometry is a powerful analytical technique that enables identification of molecules present in biological and environmental samples. However, due to the complexity of its experimental data, existing methods for interpretation of mass spectra are limited and mostly rely on annotated spectral libraries. The goal of the project is to develop novel deep learning models for the identification of molecules directly from experimental mass spectra. More precisely, the project involves research of representation learning from millions of raw, unannotated spectra and subsequent deep generative modeling for de novo elucidation of molecular structures.

Track:
Interdisciplinary Track
PhD Duration:
August 17th, 2023 - September 11th, 2027
ELLIS Edge Newsletter
Join the 6,000+ people who get the monthly newsletter filled with the latest news, jobs, events and insights from the ELLIS Network.